This is the official implementation for cellNN, based on the work of “Cell Spatial Analysis […]
Random-walk: Alleviating tiling effect in high-resolution histological whole slide image synthesis
This is the official implementation for: Alleviating tiling effect by random walk sliding window in […]
PixN2N-HD: Image Synthesis for Multiplexed Immunofluorescence Imaging
This is the official implementation for Image Synthesis for Multiplexed Immunofluorescence Imaging using paired data […]
MemSeg: Topological-Preserving Membrane Skeleton Segmentation in Multiplex Immunofluorescence Imaging
This is the official implementation for: Topological-Preserving Membrane Skeleton Segmentation in Multiplex Immunofluorescence Imaging. Source […]
MxIF Q-score: Biology-Informed Quality Assurance for Multiplexed Immunofluorescence Imaging
This is the official implementation of MxIF Q-score: Biology-Informed Quality Assurance for Multiplexed Immunofluorescence Imaging. Source […]
GCA-informatics: A cross-platform informatics system for the Gut Cell Atlas: integrating clinical, anatomical and histological data
This is the official implementation for: a cross-platform informatics system for the Gut Cell Atlas: […]
CoNIC: Nucleus subtype classification using inter-modality learning
This is the official implementation for: Nucleus subtype classification using inter-modality learning. The data related to […]
GDL: Exploring shared memory architectures for end-to-end gigapixel deep learning
This is the official implementation for: Exploring shared memory architectures for end-to-end gigapixel deep learning Source […]
Tangram: Influence of cell-type ratio on spatially resolved single-cell transcriptomes using the Tangram algorithm: based on implementation on single-cell and MxIF data
This is the official implementation of Influence of cell-type ratio on spatially resolved single-cell transcriptomes […]
SAM: Segment anything model (SAM) for digital pathology: Assess zero-shot segmentation on whole slide imaging
This is the official implementation of Segment anything model (SAM) for digital pathology: Assess zero-shot […]